Browse of TCMCG051C14794 protein

CDS

Accession Number	TCMCG051C14794
gbkey	CDS
Protein Id	XP_006384677.1
Location	complement(join(20425687..20425809,20426125..20426223,20426920..20426991,20427116..20427209,20427529..20427729,20427849..20428127,20428726..20428838,20428944..20429043,20429120..20429242,20429806..20429873,20430682..20430837,20430924..20431070,20431211..20431477,20431567..20431651,20431730..20431881,20431967..20432113,20432196..20432249,20432404..20432539,20432761..20432894,20433088..20433651))
Gene	LOC18097999
GeneID	18097999
Organism	Populus trichocarpa

Protein

Length	1037aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA17973
db_source	XM_006384615.2
Definition	DNA repair protein RAD5A isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category	KL
Description	SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K15505        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000724        [VIEW IN EMBL-EBI] GO:0000725        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006302        [VIEW IN EMBL-EBI] GO:0006310        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009292        [VIEW IN EMBL-EBI] GO:0009294        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044764        [VIEW IN EMBL-EBI] GO:0045003        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGGAACCAAGGTAACCGAAGAGCTAGTCTCCACCGTCCGATCAATCGTTGGCTGTGATTTCTCCGATATGGACATAATCAGAGCTCTCCACTTGGCAAAAAACGACCCCACCGCTGCAATCAACATCATCCTTGATACCCCGAATTTTATTTCCAAACAAAAAAACCTAACCCCCAAAACCCCAAATCCAAAATCTAAAACCGTACCCTACAAGCCACCAAATTTTGTCGTTAAAGATAACGGAAACCGTAACTCGAGCCAGAATTTAGAAGTCAATTGCGTTGAAAACGACGCGAGTGACAGCACTGTTGGTGATAATGGGAGTGTTTCGGGTTTGGTCGGGAGTGAATGGTGGTTTGTTGGTTGCGTTGAAGTGGCGGGGTTGTCGACGTGTAAAGGGAGGAGAGTGAAGGCTGGTGATGAAGTGGATTTCACATTTCCTTTGAAGAGTAAAAGTTCGATTTCGCCTTCGCCTTCGCCGGGTAAGGGTTCTGGGAGGAGAAGGCAGACTGCGACAGCGTGCTCGGAGATTGTTAGGTTTTCTACGAAAGATAGTGGAGAGCTTGGTCGAATACCTAATGATTGGGCACGGTGTCTTTTGCCGCTTGTTAGAGATGGAAAGGTCAGGATTATGGGATGTTGTAAATCTGCTCCTAACGTGCTAGGCATAATGGATACAATTCAATTATCAATAAGTGTATACTTGAATAGTGTAATGTTCCACAAGCACCACCAGACCTCACTTAAAGCAACTGCCAATTCCACTGAAGAAACAGTCGGTCATCCTCTTTCAATCCTTTTCTGCTTGCTTGGCCTGACCCCTTTTAAGAAGGCAGAATTTACGCCTGCTGATTTGAACACAAGGAAGCGACCTCTGAACTCAAAGGATGGTTCTGGTCTTCCCGTGTCATTGTTAAACGCCAACAAGTCTAAGAATCAATCTGGAAATGGAAATGAAATTGAGAATGAGGAGTCCATTTCAGATGCAGATCTTGAGAATATTGTTGGTGGTGGAGACAGCTCTGAGTTAGAGGAAATGGATCCTCCAAGTACACTCCAATGTGAGCTTCGTCCCTACCAAAAGCAGGCCCTACATTGGATGATTCATCTGGAGAAGGGAAAATGTATGGATGAGGCAGCAACAACTCTTCATCCATGTTGGGAGGCTTATCATTTAGCAGACAAGAGGGAGCTTGTTGTCTATCTGAATGTTTTTTCAGGTGATGCTACAATAGAATTTCCAAGCACACTTCAAATGGCCAGAGGAGGAATTCTGGCAGATGCTATGGGACTTGGGAAGACCATCATGACCATATCCCTCCTACTCACTCATTCAGACAAGGGTGGGTTATCAAATAGTCAATCTGGGAATCAGCTTTGCACTGGAGGTGGTTCAAGTGATAGCTCAGACCAACATCCAAATCAATTGAACAAGGCAACAAAATTTTCAGGCTTTGATAAGTTGAAGCAAAAGAAGATGCTTGTAAATGGTGGCAATCTAATAATATGTCCAGTGACTCTTCTGGGCCAGTGGAAGGCGGAGTTAGAAATTCATGCCCAACCTGGTTCTTTGTCTGTTTATGTTCATTACGGACAAAGCAGAGTGAAGGATGCAAATTTTCTTGCCCAGAGTAATGTTGTAATAACTACATATGGAGTGTTAGCCTCAGATTTTTCAGCAGAGGATGCTGTAGGGAATGGGGGACTCTATTCAGTCCATTGGTTTAGAGTGGTTCTTGATGAGGCCCATACCATAAAATCCTCAAAAAGTCAAATTTCGATGGCTGCTGCTGCTCTGGTTGCTGATCGTCGTTGGTGTCTTACTGGGACTCCCATTCAGAACAATGTGGAGGACATTTACAGCCTTCTTCGGTTTTTGAAGGTGGAACCTTGGGGAAATTGGGCATGGTGGAATAAACTTGTCCAAAAACCATTTGAGGAGGGTGATGAGAGAGGGCTAAAGTTGGTCAAGTCCATCTTAAAACCTATTATGTTAAGGAGAACAAAGACCAGTCGAGATCGAGAGGGCAGGCCAATTCTAGTTCTCCCTCCAGCTGATGTTCAGGTGATTTACTGCCAACTAACAGAAGCTGAAAAAGATTTCTACGAGGCTTTGTTTAAAAAATCCAAGGTTAAGTTTGATCAATTTGTTGAGCAAGGGCGGGTTCTTCATAATTATGCTTCTATTTTGGAATTACTTTTACGTCTTCGTCAATGCTGTGATCATCCTTTTCTTGTGATGAGTCGAGGTGATACGCAAGAATATTCTGATCTGAACAAGCTAGCTAAACGTTTCCTTAAAGGTGACCAGATTGTCCTTGAAGGAGAAGCAATAAATGTGCCTTCAAGGGCATACATTAAAGAGGTTGTGGAGGAGCTAAGTAAGGGAGAGCAGGGAGAGTGTCCAATCTGTCTCGAGGCATGTGAAGATGCAGTATTGACTCCTTGTGCTCATCGATTGTGTCGAGAGTGTCTCCTGGCAAGTTGGCGAAATGCTAGTTCCGGTTTATGTCCTGTTTGTAGGAAAGCCATCACAAGGCAAGAGCTTATTACGGCTCCGACTGACAGTAGATTCCAGATAGATATTGAGAAAAATTGGGTTGAATCTTCCAAAATTGTGGCTCTCTTGCAAGAACTAGAAATTCTTCGTTTGTCAGGATCTAAAAGCATTCTCTTCAGTCAGTGGACTGCATTTCTGGATCTTTTACAAATCCCTCTTTCCAGGAGTAACATTTCATTTGTTCGTCTTGATGGGACTCTAAACCAGCAGCAGCGTGAAAGAGTTATAAAACAGTTTTCAGAAGATGACAGCATCCTGGTATTGCTGATGTCACTGAAGGCTGGAGGGGTAGGGATAAATTTAACAGCAGCGTCCAATGCCTTTGTTATGGATCCATGGTGGAATCCAGCTGTAGAGGAGCAAGCTGTCATGCGTATTCATCGCATTGGACAAACTAAAAGAGTGATGATCAGGCGGTTCATTGTGAAGGGAACAGTTGAGGAAAGAATGGAAGCAGTGCAAGCGCGCAAGCAGCTAATGATTTCAGGTGCCTTAACTGATCAAGAAGTTCGAACTGCGCGTATTGAAGAGCTGAAGATGCTGTTTACATAG

Protein:   MGTKVTEELVSTVRSIVGCDFSDMDIIRALHLAKNDPTAAINIILDTPNFISKQKNLTPKTPNPKSKTVPYKPPNFVVKDNGNRNSSQNLEVNCVENDASDSTVGDNGSVSGLVGSEWWFVGCVEVAGLSTCKGRRVKAGDEVDFTFPLKSKSSISPSPSPGKGSGRRRQTATACSEIVRFSTKDSGELGRIPNDWARCLLPLVRDGKVRIMGCCKSAPNVLGIMDTIQLSISVYLNSVMFHKHHQTSLKATANSTEETVGHPLSILFCLLGLTPFKKAEFTPADLNTRKRPLNSKDGSGLPVSLLNANKSKNQSGNGNEIENEESISDADLENIVGGGDSSELEEMDPPSTLQCELRPYQKQALHWMIHLEKGKCMDEAATTLHPCWEAYHLADKRELVVYLNVFSGDATIEFPSTLQMARGGILADAMGLGKTIMTISLLLTHSDKGGLSNSQSGNQLCTGGGSSDSSDQHPNQLNKATKFSGFDKLKQKKMLVNGGNLIICPVTLLGQWKAELEIHAQPGSLSVYVHYGQSRVKDANFLAQSNVVITTYGVLASDFSAEDAVGNGGLYSVHWFRVVLDEAHTIKSSKSQISMAAAALVADRRWCLTGTPIQNNVEDIYSLLRFLKVEPWGNWAWWNKLVQKPFEEGDERGLKLVKSILKPIMLRRTKTSRDREGRPILVLPPADVQVIYCQLTEAEKDFYEALFKKSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLKGDQIVLEGEAINVPSRAYIKEVVEELSKGEQGECPICLEACEDAVLTPCAHRLCRECLLASWRNASSGLCPVCRKAITRQELITAPTDSRFQIDIEKNWVESSKIVALLQELEILRLSGSKSILFSQWTAFLDLLQIPLSRSNISFVRLDGTLNQQQRERVIKQFSEDDSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKRVMIRRFIVKGTVEERMEAVQARKQLMISGALTDQEVRTARIEELKMLFT